check out http://murga-linux.com/puppy/viewtopic.php?t=53171 for info
run this command if you want to scan recursively and move the infected files to eg. /somewhere
here run this:
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clamscan -r --move=/home/USER/VIRUS /home/USER
and /home/USER with whichever directory you are wanting to scan like your whole filesystem /
the above example was taken fro launchpad for ubuntu usesr so it will differ for each different OS naturally
mine is eg:
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clamscan -r --move=/mnt/home/vault /
Nevermind, they both work