Need a .pet to start simulations of COVID-19 proteins.

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ethplorer
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Need a .pet to start simulations of COVID-19 proteins.

#1 Post by ethplorer »

I tried installing the deb file here but its not working in both tahrpup and BionicPup. So i'm requesting that maybe you guys can also help create a pet package for it.


https://foldingathome.org/start-folding/
Last edited by ethplorer on Wed 25 Mar 2020, 13:06, edited 1 time in total.

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rcrsn51
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#2 Post by rcrsn51 »

What deb file? Details please.

ethplorer
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#3 Post by ethplorer »

rcrsn51 wrote:What deb file? Details please.
updated the link. https://foldingathome.org/start-folding/

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bigpup
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#4 Post by bigpup »

not working in both tahrpup and BionicPup
Are these the 32bit versions?
The deb says it is 32bit software.

Or

64 bit versions with their 32 bit compatibility sfs loaded?
The things they do not tell you, are usually the clue to solving the problem.
When I was a kid I wanted to be older.... This is not what I expected :shock:
YaPI(any iso installer)

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fredx181
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#5 Post by fredx181 »

It's a python based progam, so is for 32-bit and 64-bit, to make it work install besides the .deb also python3.6 from PPM. EDIT: No, install python-gtk2 from PPM (not sure if it's enough, it may have other dependencies for the program to run properly).

Fred

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Keef
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#6 Post by Keef »

How did you try to start it?
The binaries start with capitals eg FAHClient (which is the main one you need to run I think).

I got it running on FatDog by combining the debs and making an SFS. First though I had manually installed them, and had to mess about with the python libs as 'fah' was not being found. Never got my head round python, so not entirely sure what I did (or what was really needed). Will have to try it with no savefolder to check properly, but maybe later. I always have the devx loaded as well.

Anyway it runs:
Attachments
FAH3.jpg
(91.74 KiB) Downloaded 86 times
FAH2.jpg
(96.99 KiB) Downloaded 92 times
FAH1.jpg
(66.77 KiB) Downloaded 92 times

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Keef
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#7 Post by Keef »

My SFS attempt turned out to be waste of space. It was basically running off stuff I had forgotten to remove first, and failed to load again properly after I removed the offending bits.

Re-installed the 3 debs after converting to FatDog format. The viewer did fail though, so installed it manually.
I then had to move the contents of /usr/lib/python2.7/dist-packages/ (two directories) to:
/usr/lib64/python-2.7/site-packages/

All up and running again now.
It puts all its config and log files etc into root.
I am missing libcuda.so and libOpenCL (which make use of the GPU I believe) but this is not critical.

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